01
AI-based protein & interaction analysis
Structure prediction, binding and interaction modeling, and embedding-based analysis of protein function using current foundation models.
Molecular discovery and computational biology
Computational biology for the agentic age.
Vaske Genomics is a computational biology consultancy led by Charles Vaske, PhD. We combine twenty years of experience turning sequencing data into decisions, from academic discovery through FDA-cleared diagnostics, with a network of bioinformaticians, cloud engineers, and visualization specialists staffed to each engagement.
Services
What we work on
For academic labs, biotech and pharma teams, and clinical laboratories. Hourly or project-based, with teams sized to the work.
02
AI in cheminformatics
Machine-learning models for compound property prediction, virtual screening, and target–ligand prioritization.
03
Variant calling & interpretation
Germline and somatic pipelines, FFPE-aware, with curated annotation and IGV-ready outputs.
04
Multi-omic integration
Expression, methylation, copy number, and protein abundance combined on top of pathway priors. Paradigm-style modeling on request.
05
Regulatory & validation support
Analytical validation studies, accuracy reports, and submission-ready documentation for CLIA, NYS, and FDA pathways.
06
Diligence & methods review
Independent review of pipelines, papers, or vendor claims for academic, biotech, and investor clients.
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